SciTransfer
ODIN · Project

Environmental Genomic Surveillance System for Early Disease and AMR Outbreak Detection

healthTestedTRL 5

Imagine a smoke detector, but for diseases in a city's water system. Instead of waiting for people to get sick and visit a doctor, this system scans wastewater to find traces of germs and antibiotic resistance. It's like finding a needle in a haystack using a high-tech digital magnet to warn health officials before a full-blown crisis hits.

By the numbers
9
partners
8
countries
19
total deliverables
The business problem

What needed solving

Public health officials in resource-poor regions lack real-time data on disease outbreaks and antibiotic resistance. Current clinical reporting is often too slow to prevent widespread infection.

The solution

What was built

A mobile wastewater surveillance system and semi-automated bioinformatics tools. These include a visual dashboard for reporting genomic trends in human pathogens.

Audience

Who needs this

Municipal water utility companiesPublic health agency directorsEnvironmental monitoring startupsGlobal health NGOs
Business applications

Who can put this to work

Water Management
enterprise
Target: Municipal water utility provider

If you are a water utility provider dealing with unpredictable contamination in remote areas — this project developed a mobile wastewater surveillance system that allows for timely detection and reporting of outbreaks. This enables faster response times and better protection of drinking-water supplies.

Biotechnology
mid-size
Target: Diagnostics and sequencing kit manufacturer

If you are a diagnostics company dealing with the need for specialized tools in resource-poor regions — this project developed semi-automated bioinformatics tools for processing genomic epidemiology data. This provides a blueprint for creating streamlined, low-infrastructure sequencing workflows.

Public Health Consulting
SME
Target: Epidemiological risk management firm

If you are a risk management firm dealing with the lack of real-time data on antimicrobial resistance — this project developed a visual dashboard for genomic data. This allows for data-driven evidence to be conveyed to decision-makers for more efficient public health policies.

Frequently asked

Quick answers

What is the cost or price of implementing this system?

Based on available project data, no specific pricing or cost structures for the system are provided.

Can this be scaled to an industrial level?

The project focuses on creating a sustainable model for sub-Saharan conditions, including mobile surveillance systems and semi-automated data processing to handle large genomic data sets.

What are the IP and licensing terms for the bioinformatics tools?

Based on available project data, specific licensing terms are not mentioned, though the project emphasizes developing standards for sharing genomic data across borders.

How does the system integrate with existing health infrastructure?

It integrates by transferring generated data to key health system actors via a visual dashboard to support public health interventions.

What is the timeline for deployment?

The project period is from 2023-07-01 to 2026-06-30.

Consortium

Who built it

The consortium is heavily academic and research-oriented, consisting of 4 universities and 5 research organizations across 8 countries. There is a 0% industry ratio, meaning the current output is focused on scientific validation and capacity building rather than immediate commercial productization. The presence of partners in both Europe and sub-Saharan Africa (e.g., BF, CD, TZ) indicates a strong focus on cross-border implementation and field testing.

How to reach the team

Lunds Universitet, Sweden

Next steps

Talk to the team behind this work.

Contact us to find partners for adapting these genomic surveillance tools for commercial water-testing markets.

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