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GREAT-LIFE · Project

Real-time Field Sequencing and Bioinformatics for Rapid Infectious Disease Detection

healthTestedTRL 5

Imagine having a high-tech lab that fits in a backpack and runs on a laptop. Instead of sending samples to a distant city and waiting weeks for results, doctors can identify germs and antibiotic resistance right where the patient is. It's like moving from sending a letter by mail to sending an instant text message for medical diagnosis.

By the numbers
6
countries with established sequencing
10
consortium partners
The business problem

What needed solving

Traditional infectious disease sampling in remote, high-migration areas is logistically difficult and lacks real-time value for local patient care. Large genomic data files cannot be easily transferred over weak internet connections to central labs.

The solution

What was built

A system combining field-deployable nanopore sequencing with laptop-based bioinformatics that transmits only the analysis results via mobile networks.

Audience

Who needs this

Remote diagnostic clinic operatorsGlobal health NGOsGenomic sequencing hardware manufacturersPublic health monitoring agencies
Business applications

Who can put this to work

Medical Diagnostics
mid-size
Target: Point-of-Care Testing (POCT) Developer

If you are a POCT developer dealing with the lack of diagnostic tools in remote areas — this project developed laptop-based bioinformatics and field-deployable sequencing that provides immediate results for direct patient care.

Digital Health
SME
Target: Health Informatics Software Provider

If you are a software provider dealing with the difficulty of transferring massive genomic data over poor networks — this project developed a way to share only the analytic output via mobile net, removing the need for high-performance computing.

Public Health
enterprise
Target: Epidemiological Surveillance Agency

If you are an agency dealing with unknown antimicrobial resistance (AMR) patterns in high-migration zones — this project developed a real-time linking system between frontline sites and central hubs to identify local drivers of AMR.

Frequently asked

Quick answers

What is the cost or pricing for this technology?

Based on available project data, specific pricing for the bioinformatics tools or sequencing kits is not provided; only the total EU contribution of EUR 5,207,500 is listed.

Can this be scaled to an industrial level?

The project demonstrates scalability by establishing sequencing across 6 countries and linking them to a central hub in Tanzania.

What are the IP and licensing terms for the bioinformatics tools?

Based on available project data, there is no mention of specific patents or licensing agreements for the newly developed bioinformatics solutions.

How does this integrate with existing health systems?

It integrates by using mobile networks to send analytic outputs from laptops in the field directly to public health authorities.

What is the timeline for deployment?

The project period runs from 2023-07-01 to 2028-06-30, indicating a multi-year development and implementation phase.

Consortium

Who built it

The consortium is heavily research-oriented, consisting of 10 partners across 8 countries. With 4 universities and 3 research institutes, the technical expertise is high, but the industrial presence is low at only 1 company (10% ratio), suggesting the current focus is on validation rather than immediate commercialization.

How to reach the team

Contact Danmarks Tekniske Universitet (DTU) regarding the bioinformatics workflow.

Next steps

Talk to the team behind this work.

Contact us to explore licensing opportunities for the field-deployable bioinformatics tools.

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